Software
Open-source tools for cryo-EM analysis and molecular dynamics simulations
GitHub Repositories
CryoLigATE
Cryo-EM · Deep Learning · Ligand Building
A deep-learning tool for enhancing the resolvability of cryo-EM maps in protein–ligand complexes. Built to improve ligand density interpretability and guide structure refinement in drug-discovery targets.
View on GitHub →MonteCarloPathwaySearch
Molecular Dynamics · Pathway Search · Enhanced Sampling
A Monte Carlo-based framework for exploring conformational pathways and transition states in molecular dynamics simulations. Useful for studying large-scale protein motions and rare-event sampling.
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